Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Gm10138-203ENSMUST00000206952 366 ntBASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb1Q91XX8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhgb1Q91XX8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb1Q91XX8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Gm15375-201ENSMUST00000119510 849 ntBASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb1Q91XX8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb1Q91XX8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhgb1Q91XX8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb1Q91XX8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb1Q91XX8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb1Q91XX8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb1Q91XX8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.57■□□□□ 0.56
Pcdhgb1Q91XX8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms