Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb4Q91XX6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb4Q91XX6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Gm15039-201ENSMUST00000118914 875 ntBASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdhgb4Q91XX6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Gm37179-201ENSMUST00000194862 823 ntBASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb4Q91XX6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb4Q91XX6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb4Q91XX6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb4Q91XX6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Pcdhgb4Q91XX6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb4Q91XX6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb4Q91XX6 Mir5133-201ENSMUST00000174955 77 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms