Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trex1Q91XB0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trex1Q91XB0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.59■□□□□ 0.89
Trex1Q91XB0 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.59■□□□□ 0.89
Trex1Q91XB0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trex1Q91XB0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.58■□□□□ 0.89
Trex1Q91XB0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trex1Q91XB0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trex1Q91XB0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.57■□□□□ 0.88
Trex1Q91XB0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Gm38027-201ENSMUST00000192315 235 ntBASIC20.57■□□□□ 0.88
Trex1Q91XB0 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.57■□□□□ 0.88
Trex1Q91XB0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trex1Q91XB0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trex1Q91XB0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Tgds-204ENSMUST00000228543 1594 ntBASIC20.55■□□□□ 0.88
Trex1Q91XB0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Trex1Q91XB0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.55■□□□□ 0.88
Trex1Q91XB0 Gm4974-201ENSMUST00000209974 875 ntBASIC20.55■□□□□ 0.88
Trex1Q91XB0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trex1Q91XB0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Gm6659-201ENSMUST00000174752 547 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms