Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb11Q91UZ8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb11Q91UZ8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb11Q91UZ8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb11Q91UZ8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Gm11249-201ENSMUST00000117071 859 ntBASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Gm27275-201ENSMUST00000184318 272 ntBASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Fst-202ENSMUST00000223640 2612 ntBASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb11Q91UZ8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.36■□□□□ 0.53
Pcdhb11Q91UZ8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Gm37856-201ENSMUST00000191634 999 ntBASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb11Q91UZ8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms