Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TraipQ8VIG6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.09■□□□□ 0.65
TraipQ8VIG6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TraipQ8VIG6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Gm13559-201ENSMUST00000120476 863 ntBASIC19.07■□□□□ 0.64
TraipQ8VIG6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Gm10517-202ENSMUST00000192970 758 ntBASIC19.07■□□□□ 0.64
TraipQ8VIG6 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.07■□□□□ 0.64
TraipQ8VIG6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Gm9987-201ENSMUST00000069768 567 ntBASIC19.07■□□□□ 0.64
TraipQ8VIG6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.07■□□□□ 0.64
TraipQ8VIG6 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.07■□□□□ 0.64
TraipQ8VIG6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TraipQ8VIG6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Gm4974-201ENSMUST00000209974 875 ntBASIC19.06■□□□□ 0.64
TraipQ8VIG6 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.06■□□□□ 0.64
TraipQ8VIG6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TraipQ8VIG6 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.05■□□□□ 0.64
TraipQ8VIG6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.05■□□□□ 0.64
TraipQ8VIG6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TraipQ8VIG6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TraipQ8VIG6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TraipQ8VIG6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.04■□□□□ 0.64
TraipQ8VIG6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TraipQ8VIG6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TraipQ8VIG6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TraipQ8VIG6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Gm38027-201ENSMUST00000192315 235 ntBASIC19.03■□□□□ 0.64
TraipQ8VIG6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TraipQ8VIG6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.03■□□□□ 0.64
TraipQ8VIG6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms