Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cspg4Q8VHY0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Gm16061-201ENSMUST00000122167 857 ntBASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.42■□□□□ 0.06
Cspg4Q8VHY0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cspg4Q8VHY0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Gm8587-201ENSMUST00000076538 843 ntBASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Mir2861-201ENSMUST00000175539 82 ntBASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cspg4Q8VHY0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Gm18733-201ENSMUST00000173950 856 ntBASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cspg4Q8VHY0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms