Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Gm11355-201ENSMUST00000121120 306 ntBASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lmcd1Q8VEE1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Gm7370-201ENSMUST00000219471 767 ntBASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lmcd1Q8VEE1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lmcd1Q8VEE1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lmcd1Q8VEE1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Gm11950-201ENSMUST00000121615 838 ntBASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Gm28659-201ENSMUST00000188013 759 ntBASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lmcd1Q8VEE1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lmcd1Q8VEE1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Gm7791-201ENSMUST00000219066 539 ntBASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lmcd1Q8VEE1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms