Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rprd1aQ8VDS4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rprd1aQ8VDS4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rprd1aQ8VDS4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rprd1aQ8VDS4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rprd1aQ8VDS4 Tgds-204ENSMUST00000228543 1594 ntBASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Gm10138-203ENSMUST00000206952 366 ntBASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms