Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Fst-202ENSMUST00000223640 2612 ntBASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf8Q8VC56 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf8Q8VC56 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf8Q8VC56 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf8Q8VC56 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf8Q8VC56 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf8Q8VC56 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rnf8Q8VC56 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Gm7290-201ENSMUST00000104990 617 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Gm12918-201ENSMUST00000120234 636 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Gm15710-201ENSMUST00000121821 636 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Gm5075-201ENSMUST00000196916 622 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf8Q8VC56 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rnf8Q8VC56 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Nespas-201ENSMUST00000143738 1083 ntBASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf8Q8VC56 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Gm6420-201ENSMUST00000193885 723 ntBASIC17.23■□□□□ 0.35
Rnf8Q8VC56 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf8Q8VC56 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf8Q8VC56 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf8Q8VC56 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf8Q8VC56 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms