Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps39Q8R5L3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps39Q8R5L3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Gm18284-201ENSMUST00000172604 624 ntBASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps39Q8R5L3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps39Q8R5L3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps39Q8R5L3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.94■□□□□ 0.46
Vps39Q8R5L3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Gm6365-201ENSMUST00000054711 744 ntBASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps39Q8R5L3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms