Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chrna3Q8R4G9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna3Q8R4G9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna3Q8R4G9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chrna3Q8R4G9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.58■□□□□ 0.4
Chrna3Q8R4G9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna3Q8R4G9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna3Q8R4G9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms