Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdt1Q8R4E9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdt1Q8R4E9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdt1Q8R4E9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdt1Q8R4E9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdt1Q8R4E9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdt1Q8R4E9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdt1Q8R4E9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdt1Q8R4E9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdt1Q8R4E9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdt1Q8R4E9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Fst-202ENSMUST00000223640 2612 ntBASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdt1Q8R4E9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdt1Q8R4E9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms