Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vopp1Q8R1C3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.17■□□□□ 0.66
Vopp1Q8R1C3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vopp1Q8R1C3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vopp1Q8R1C3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Fst-202ENSMUST00000223640 2612 ntBASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vopp1Q8R1C3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vopp1Q8R1C3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vopp1Q8R1C3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vopp1Q8R1C3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vopp1Q8R1C3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vopp1Q8R1C3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vopp1Q8R1C3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vopp1Q8R1C3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vopp1Q8R1C3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Gm24841-201ENSMUST00000158676 357 ntBASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vopp1Q8R1C3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Gm6659-201ENSMUST00000174752 547 ntBASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Gm18032-201ENSMUST00000222541 538 ntBASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vopp1Q8R1C3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vopp1Q8R1C3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms