Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm6365-201ENSMUST00000054711 744 ntBASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Gm7290-201ENSMUST00000104990 617 ntBASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Gm12918-201ENSMUST00000120234 636 ntBASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Gm15710-201ENSMUST00000121821 636 ntBASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Gm5075-201ENSMUST00000196916 622 ntBASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cchcr1Q8K2I2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cchcr1Q8K2I2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cchcr1Q8K2I2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.18■□□□□ 0.98
Cchcr1Q8K2I2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cchcr1Q8K2I2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cchcr1Q8K2I2 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms