Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm11927-201ENSMUST00000118472 759 ntBASIC19.42■□□□□ 0.7
Trim68Q8K243 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim68Q8K243 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim68Q8K243 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim68Q8K243 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim68Q8K243 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Rarb-207ENSMUST00000225921 2756 ntBASIC19.41■□□□□ 0.7
Trim68Q8K243 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Trim68Q8K243 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim68Q8K243 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trim68Q8K243 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim68Q8K243 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim68Q8K243 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim68Q8K243 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.4■□□□□ 0.7
Trim68Q8K243 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Trim68Q8K243 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.4■□□□□ 0.7
Trim68Q8K243 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim68Q8K243 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim68Q8K243 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Trim68Q8K243 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim68Q8K243 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim68Q8K243 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim68Q8K243 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim68Q8K243 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim68Q8K243 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim68Q8K243 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim68Q8K243 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.38■□□□□ 0.69
Trim68Q8K243 Gm30025-201ENSMUST00000218555 728 ntBASIC19.38■□□□□ 0.69
Trim68Q8K243 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.38■□□□□ 0.69
Trim68Q8K243 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.38■□□□□ 0.69
Trim68Q8K243 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Flg-201ENSMUST00000050758 1488 ntBASIC19.38■□□□□ 0.69
Trim68Q8K243 Gm7367-201ENSMUST00000057611 492 ntBASIC19.38■□□□□ 0.69
Trim68Q8K243 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim68Q8K243 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Trim68Q8K243 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim68Q8K243 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim68Q8K243 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim68Q8K243 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim68Q8K243 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim68Q8K243 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim68Q8K243 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim68Q8K243 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim68Q8K243 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms