Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Rtn1Q8K0T0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Rtn1Q8K0T0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rtn1Q8K0T0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Gm37856-201ENSMUST00000191634 999 ntBASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn1Q8K0T0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn1Q8K0T0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Rtn1Q8K0T0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.67■□□□□ 0.9
Rtn1Q8K0T0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn1Q8K0T0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.65■□□□□ 0.9
Rtn1Q8K0T0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn1Q8K0T0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn1Q8K0T0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms