Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rl1Q8K0S5 BC021767-201ENSMUST00000126387 1716 ntBASIC18.2■□□□□ 0.5
Rtn4rl1Q8K0S5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rl1Q8K0S5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm27741-201ENSMUST00000185060 237 ntBASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Ank2-226ENSMUST00000189368 339 ntBASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rtn4rl1Q8K0S5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rl1Q8K0S5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn4rl1Q8K0S5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Gm7638-201ENSMUST00000121348 967 ntBASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rl1Q8K0S5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.14■□□□□ 0.5
Rtn4rl1Q8K0S5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.14■□□□□ 0.5
Rtn4rl1Q8K0S5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Rtn4rl1Q8K0S5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Rtn4rl1Q8K0S5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.14■□□□□ 0.5
Rtn4rl1Q8K0S5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.14■□□□□ 0.5
Rtn4rl1Q8K0S5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rl1Q8K0S5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms