Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CroccQ8CJ40 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CroccQ8CJ40 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CroccQ8CJ40 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CroccQ8CJ40 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.16■□□□□ 0.34
CroccQ8CJ40 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CroccQ8CJ40 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CroccQ8CJ40 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Gm2559-201ENSMUST00000201323 363 ntBASIC17.15■□□□□ 0.34
CroccQ8CJ40 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CroccQ8CJ40 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CroccQ8CJ40 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.14■□□□□ 0.33
CroccQ8CJ40 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CroccQ8CJ40 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CroccQ8CJ40 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Gm38285-201ENSMUST00000192928 922 ntBASIC17.13■□□□□ 0.33
CroccQ8CJ40 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Gm13158-201ENSMUST00000122007 736 ntBASIC17.13■□□□□ 0.33
CroccQ8CJ40 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CroccQ8CJ40 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CroccQ8CJ40 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CroccQ8CJ40 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.1■□□□□ 0.33
CroccQ8CJ40 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CroccQ8CJ40 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms