Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Depdc1aQ8CIG0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Odf3b-204ENSMUST00000227834 930 ntBASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1aQ8CIG0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Timm23-208ENSMUST00000226683 750 ntBASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1aQ8CIG0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Gm3375-201ENSMUST00000203929 796 ntBASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Fst-202ENSMUST00000223640 2612 ntBASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1aQ8CIG0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Gm10517-202ENSMUST00000192970 758 ntBASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1aQ8CIG0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Gm13401-201ENSMUST00000117074 291 ntBASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.21■□□□□ 0.83
Depdc1aQ8CIG0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms