Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.51■□□□□ 0.23
Pdlim5Q8CI51 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim5Q8CI51 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Gm6365-201ENSMUST00000054711 744 ntBASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim5Q8CI51 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Gm26571-201ENSMUST00000181399 666 ntBASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.48■□□□□ 0.23
Pdlim5Q8CI51 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm7290-201ENSMUST00000104990 617 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm12918-201ENSMUST00000120234 636 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm15710-201ENSMUST00000121821 636 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm8495-201ENSMUST00000188740 694 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm5075-201ENSMUST00000196916 622 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Gm8969-201ENSMUST00000199694 526 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim5Q8CI51 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pdlim5Q8CI51 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Pdlim5Q8CI51 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim5Q8CI51 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms