Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Sox30Q8CGW4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sox30Q8CGW4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox30Q8CGW4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sox30Q8CGW4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox30Q8CGW4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox30Q8CGW4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.63■□□□□ 0.73
Sox30Q8CGW4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox30Q8CGW4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox30Q8CGW4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox30Q8CGW4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox30Q8CGW4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms