Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Hist3h2bbQ8CGP0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.68□□□□□ -0.22
Hist3h2bbQ8CGP0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Gm45855-201ENSMUST00000212546 880 ntBASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hist3h2bbQ8CGP0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hist3h2bbQ8CGP0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist3h2bbQ8CGP0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms