Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm6211-202ENSMUST00000167849 925 ntBASIC20.54■□□□□ 0.88
Smc2Q8CG48 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc2Q8CG48 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smc2Q8CG48 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Gm27405-201ENSMUST00000184201 112 ntBASIC20.53■□□□□ 0.88
Smc2Q8CG48 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.53■□□□□ 0.88
Smc2Q8CG48 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.53■□□□□ 0.88
Smc2Q8CG48 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc2Q8CG48 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Gm7291-201ENSMUST00000199147 382 ntBASIC20.52■□□□□ 0.88
Smc2Q8CG48 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc2Q8CG48 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smc2Q8CG48 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smc2Q8CG48 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc2Q8CG48 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc2Q8CG48 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Smc2Q8CG48 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Rarb-207ENSMUST00000225921 2756 ntBASIC20.48■□□□□ 0.87
Smc2Q8CG48 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc2Q8CG48 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc2Q8CG48 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.47■□□□□ 0.87
Smc2Q8CG48 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms