Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb7Q8CDY9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb7Q8CDY9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.98■□□□□ 0.47
Pcdhb7Q8CDY9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb7Q8CDY9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb7Q8CDY9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb7Q8CDY9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb7Q8CDY9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms