Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cabcoco1Q8CDT7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cabcoco1Q8CDT7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.64■□□□□ 0.41
Cabcoco1Q8CDT7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cabcoco1Q8CDT7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Tgds-204ENSMUST00000228543 1594 ntBASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Cabcoco1Q8CDT7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.61■□□□□ 0.41
Cabcoco1Q8CDT7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cabcoco1Q8CDT7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Mir7075-201ENSMUST00000184187 82 ntBASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cabcoco1Q8CDT7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms