Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.9■□□□□ 0.78
Ccdc38Q8CDN8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.78
Ccdc38Q8CDN8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Gm6211-202ENSMUST00000167849 925 ntBASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc38Q8CDN8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc38Q8CDN8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc38Q8CDN8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc38Q8CDN8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc38Q8CDN8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Gm8969-201ENSMUST00000199694 526 ntBASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms