Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx6Q8C7R7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx6Q8C7R7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfx6Q8C7R7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx6Q8C7R7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rfx6Q8C7R7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Rfx6Q8C7R7 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rfx6Q8C7R7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms