Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc187Q8C5V8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc187Q8C5V8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc187Q8C5V8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc187Q8C5V8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Gm18959-201ENSMUST00000208954 655 ntBASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ccdc187Q8C5V8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc187Q8C5V8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc187Q8C5V8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc187Q8C5V8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc187Q8C5V8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc187Q8C5V8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc187Q8C5V8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms