Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc60Q8C4J0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc60Q8C4J0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc60Q8C4J0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc60Q8C4J0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc60Q8C4J0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
Ccdc60Q8C4J0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc60Q8C4J0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc60Q8C4J0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc60Q8C4J0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Ccdc60Q8C4J0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc60Q8C4J0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc60Q8C4J0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc60Q8C4J0 Gm20760-201ENSMUST00000179197 648 ntBASIC22.86■■□□□ 1.25
Ccdc60Q8C4J0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc60Q8C4J0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Gm13158-201ENSMUST00000122007 736 ntBASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc60Q8C4J0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.84■■□□□ 1.25
Ccdc60Q8C4J0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc60Q8C4J0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ccdc60Q8C4J0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ccdc60Q8C4J0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.83■■□□□ 1.24
Ccdc60Q8C4J0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc60Q8C4J0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Mir2861-201ENSMUST00000175539 82 ntBASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Gm10138-203ENSMUST00000206952 366 ntBASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc60Q8C4J0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms