Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Gm13158-201ENSMUST00000122007 736 ntBASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp44Q8C2S0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp44Q8C2S0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Mir6349-201ENSMUST00000184059 97 ntBASIC21.04■□□□□ 0.96
Usp44Q8C2S0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp44Q8C2S0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp44Q8C2S0 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp44Q8C2S0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp44Q8C2S0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp44Q8C2S0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp44Q8C2S0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp44Q8C2S0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp44Q8C2S0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp44Q8C2S0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Gm5643-201ENSMUST00000117081 966 ntBASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp44Q8C2S0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Usp44Q8C2S0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp44Q8C2S0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21■□□□□ 0.95
Usp44Q8C2S0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp44Q8C2S0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp44Q8C2S0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Usp44Q8C2S0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp44Q8C2S0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp44Q8C2S0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.99■□□□□ 0.95
Usp44Q8C2S0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms