Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm44549-201ENSMUST00000208351 577 ntBASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh3rf3Q8C120 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf3Q8C120 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf3Q8C120 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Gm29257-201ENSMUST00000186115 639 ntBASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sh3rf3Q8C120 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Gm2399-201ENSMUST00000104944 225 ntBASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.63■□□□□ 0.57
Sh3rf3Q8C120 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf3Q8C120 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf3Q8C120 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms