Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Gm26833-201ENSMUST00000180899 440 ntBASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Gm6139-201ENSMUST00000079261 882 ntBASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Gm15039-201ENSMUST00000118914 875 ntBASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Gm8969-201ENSMUST00000199694 526 ntBASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.27■□□□□ 0.04
Lsm11Q8BUV6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm11Q8BUV6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm11Q8BUV6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm11Q8BUV6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Gm27454-201ENSMUST00000185090 204 ntBASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm11Q8BUV6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm11Q8BUV6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms