Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Tgds-204ENSMUST00000228543 1594 ntBASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig4Q8BTF7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lig4Q8BTF7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lig4Q8BTF7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig4Q8BTF7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lig4Q8BTF7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Gm6576-201ENSMUST00000169678 883 ntBASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Mir2861-201ENSMUST00000175539 82 ntBASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Gm42545-201ENSMUST00000202755 922 ntBASIC18.93■□□□□ 0.62
Lig4Q8BTF7 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig4Q8BTF7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.92■□□□□ 0.62
Lig4Q8BTF7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms