Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Suds3Q8BR65 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Suds3Q8BR65 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.39■□□□□ 0.54
Suds3Q8BR65 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Suds3Q8BR65 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.39■□□□□ 0.53
Suds3Q8BR65 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Suds3Q8BR65 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.38■□□□□ 0.53
Suds3Q8BR65 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Gm13148-201ENSMUST00000118892 745 ntBASIC18.38■□□□□ 0.53
Suds3Q8BR65 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.38■□□□□ 0.53
Suds3Q8BR65 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Suds3Q8BR65 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Suds3Q8BR65 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Suds3Q8BR65 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.35■□□□□ 0.53
Suds3Q8BR65 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Gm6211-202ENSMUST00000167849 925 ntBASIC18.35■□□□□ 0.53
Suds3Q8BR65 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms