Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Gm20760-201ENSMUST00000179197 648 ntBASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Gm37856-201ENSMUST00000191634 999 ntBASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sfr1Q8BP27 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Zfp783-201ENSMUST00000095946 670 ntBASIC18.2■□□□□ 0.5
Sfr1Q8BP27 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sfr1Q8BP27 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Trmt13-210ENSMUST00000198454 880 ntBASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sfr1Q8BP27 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Gm11927-201ENSMUST00000118472 759 ntBASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Gm10653-202ENSMUST00000139570 835 ntBASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Gm38285-201ENSMUST00000192928 922 ntBASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sfr1Q8BP27 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Gm27275-201ENSMUST00000184318 272 ntBASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sfr1Q8BP27 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Gm11249-201ENSMUST00000117071 859 ntBASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sfr1Q8BP27 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms