Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdhr3Q8BL00 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdhr3Q8BL00 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.66■□□□□ 0.1
Cdhr3Q8BL00 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdhr3Q8BL00 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdhr3Q8BL00 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms