Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Gm30025-201ENSMUST00000218555 728 ntBASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp1Q8BJQ2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Timm23-208ENSMUST00000226683 750 ntBASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp1Q8BJQ2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp1Q8BJQ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp1Q8BJQ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Usp1Q8BJQ2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.02■□□□□ 0.63
Usp1Q8BJQ2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp1Q8BJQ2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Gm10231-201ENSMUST00000181584 441 ntBASIC19■□□□□ 0.63
Usp1Q8BJQ2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Gm10175-202ENSMUST00000208752 441 ntBASIC19■□□□□ 0.63
Usp1Q8BJQ2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19■□□□□ 0.63
Usp1Q8BJQ2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp1Q8BJQ2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp1Q8BJQ2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms