Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Gm6365-201ENSMUST00000054711 744 ntBASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh20Q8BIZ0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh20Q8BIZ0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh20Q8BIZ0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.46■□□□□ 0.39
Pcdh20Q8BIZ0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh20Q8BIZ0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh20Q8BIZ0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh20Q8BIZ0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh20Q8BIZ0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh20Q8BIZ0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms