Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nod1Q8BHB0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.9■□□□□ 0.62
Nod1Q8BHB0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nod1Q8BHB0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nod1Q8BHB0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nod1Q8BHB0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nod1Q8BHB0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nod1Q8BHB0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nod1Q8BHB0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nod1Q8BHB0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nod1Q8BHB0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.86■□□□□ 0.61
Nod1Q8BHB0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.85■□□□□ 0.61
Nod1Q8BHB0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nod1Q8BHB0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nod1Q8BHB0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nod1Q8BHB0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nod1Q8BHB0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nod1Q8BHB0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nod1Q8BHB0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nod1Q8BHB0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nod1Q8BHB0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.83■□□□□ 0.6
Nod1Q8BHB0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.83■□□□□ 0.6
Nod1Q8BHB0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms