Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1bQ8BH88 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1bQ8BH88 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1bQ8BH88 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1bQ8BH88 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Depdc1bQ8BH88 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Depdc1bQ8BH88 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Depdc1bQ8BH88 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1bQ8BH88 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1bQ8BH88 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Rab3c-203ENSMUST00000224180 967 ntBASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Depdc1bQ8BH88 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Fst-202ENSMUST00000223640 2612 ntBASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1bQ8BH88 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.47■□□□□ 0.71
Depdc1bQ8BH88 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1bQ8BH88 Rarb-207ENSMUST00000225921 2756 ntBASIC19.46■□□□□ 0.71
Depdc1bQ8BH88 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1bQ8BH88 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.46■□□□□ 0.71
Depdc1bQ8BH88 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms