Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim65Q8BFW4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim65Q8BFW4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim65Q8BFW4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Gm38285-201ENSMUST00000192928 922 ntBASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim65Q8BFW4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Gm4968-201ENSMUST00000071458 858 ntBASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Zfp783-201ENSMUST00000095946 670 ntBASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Flg-201ENSMUST00000050758 1488 ntBASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim65Q8BFW4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim65Q8BFW4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim65Q8BFW4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms