Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Trim50Q810I2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim50Q810I2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.49■□□□□ 0.39
Trim50Q810I2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim50Q810I2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim50Q810I2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.48■□□□□ 0.39
Trim50Q810I2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Gm2399-201ENSMUST00000104944 225 ntBASIC17.48■□□□□ 0.39
Trim50Q810I2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Trim50Q810I2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim50Q810I2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Gm4968-201ENSMUST00000071458 858 ntBASIC17.48■□□□□ 0.39
Trim50Q810I2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim50Q810I2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim50Q810I2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim50Q810I2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim50Q810I2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim50Q810I2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim50Q810I2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Fst-202ENSMUST00000223640 2612 ntBASIC17.46■□□□□ 0.39
Trim50Q810I2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim50Q810I2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim50Q810I2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim50Q810I2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim50Q810I2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim50Q810I2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim50Q810I2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.45■□□□□ 0.38
Trim50Q810I2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.45■□□□□ 0.38
Trim50Q810I2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim50Q810I2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim50Q810I2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim50Q810I2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim50Q810I2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms