Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tnrc18Q80WC3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Gm43514-201ENSMUST00000198852 424 ntBASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.97■□□□□ 0.47
Tnrc18Q80WC3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc18Q80WC3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.96■□□□□ 0.46
Tnrc18Q80WC3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Tnrc18Q80WC3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Birc2-201ENSMUST00000054878 378 ntBASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc18Q80WC3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Gm4974-201ENSMUST00000209974 875 ntBASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc18Q80WC3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Gm27742-201ENSMUST00000184667 60 ntBASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Gm6443-201ENSMUST00000203599 874 ntBASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tnrc18Q80WC3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.92■□□□□ 0.46
Tnrc18Q80WC3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms