Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3cQ80U95 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Gm10517-202ENSMUST00000192970 758 ntBASIC21.24■□□□□ 0.99
Ube3cQ80U95 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.24■□□□□ 0.99
Ube3cQ80U95 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3cQ80U95 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Gm13836-201ENSMUST00000121159 501 ntBASIC21.23■□□□□ 0.99
Ube3cQ80U95 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ube3cQ80U95 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3cQ80U95 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Gm13401-201ENSMUST00000117074 291 ntBASIC21.21■□□□□ 0.99
Ube3cQ80U95 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Gm30025-201ENSMUST00000218555 728 ntBASIC21.21■□□□□ 0.99
Ube3cQ80U95 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Gm9987-201ENSMUST00000069768 567 ntBASIC21.21■□□□□ 0.99
Ube3cQ80U95 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ube3cQ80U95 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ube3cQ80U95 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ube3cQ80U95 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3cQ80U95 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3cQ80U95 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3cQ80U95 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3cQ80U95 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3cQ80U95 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3cQ80U95 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Ube3cQ80U95 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.19■□□□□ 0.98
Ube3cQ80U95 Gm11539-201ENSMUST00000119837 557 ntBASIC21.19■□□□□ 0.98
Ube3cQ80U95 Gm13436-201ENSMUST00000120418 567 ntBASIC21.19■□□□□ 0.98
Ube3cQ80U95 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.19■□□□□ 0.98
Ube3cQ80U95 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3cQ80U95 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Gm6433-201ENSMUST00000118634 875 ntBASIC21.18■□□□□ 0.98
Ube3cQ80U95 Gm13559-201ENSMUST00000120476 863 ntBASIC21.18■□□□□ 0.98
Ube3cQ80U95 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3cQ80U95 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3cQ80U95 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms