Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Gm21814-202ENSMUST00000203277 873 ntBASIC19.63■□□□□ 0.73
Ush1gQ80T11 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Zfp783-201ENSMUST00000095946 670 ntBASIC19.63■□□□□ 0.73
Ush1gQ80T11 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ush1gQ80T11 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.62■□□□□ 0.73
Ush1gQ80T11 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Gm43183-201ENSMUST00000200632 547 ntBASIC19.62■□□□□ 0.73
Ush1gQ80T11 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ush1gQ80T11 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.61■□□□□ 0.73
Ush1gQ80T11 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.61■□□□□ 0.73
Ush1gQ80T11 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ush1gQ80T11 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.6■□□□□ 0.73
Ush1gQ80T11 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ush1gQ80T11 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ush1gQ80T11 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ush1gQ80T11 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.59■□□□□ 0.73
Ush1gQ80T11 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.59■□□□□ 0.73
Ush1gQ80T11 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.59■□□□□ 0.73
Ush1gQ80T11 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ush1gQ80T11 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ush1gQ80T11 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ush1gQ80T11 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ush1gQ80T11 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Mtag2-201ENSMUST00000058665 714 ntBASIC19.58■□□□□ 0.72
Ush1gQ80T11 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ush1gQ80T11 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ush1gQ80T11 Gm15375-201ENSMUST00000119510 849 ntBASIC19.57■□□□□ 0.72
Ush1gQ80T11 Odf3b-204ENSMUST00000227834 930 ntBASIC19.57■□□□□ 0.72
Ush1gQ80T11 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms