Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc44a1Q6X893 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.8■□□□□ 0.92
Slc44a1Q6X893 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Gm15378-201ENSMUST00000121894 207 ntBASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Gm22240-201ENSMUST00000175225 82 ntBASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc44a1Q6X893 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Grk6-206ENSMUST00000224995 2971 ntBASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Gm10418-201ENSMUST00000100943 576 ntBASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Gm11643-201ENSMUST00000119578 864 ntBASIC20.79■□□□□ 0.92
Slc44a1Q6X893 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc44a1Q6X893 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Gm42545-201ENSMUST00000202755 922 ntBASIC20.78■□□□□ 0.92
Slc44a1Q6X893 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc44a1Q6X893 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Gm29791-202ENSMUST00000207888 369 ntBASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Idnk-204ENSMUST00000226010 1898 ntBASIC20.77■□□□□ 0.92
Slc44a1Q6X893 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc44a1Q6X893 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc44a1Q6X893 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc44a1Q6X893 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms