Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Gm4974-201ENSMUST00000209974 875 ntBASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Snrnp40Q6PE01 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Gm7284-201ENSMUST00000131667 944 ntBASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Snrnp40Q6PE01 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Gm16061-201ENSMUST00000122167 857 ntBASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Gm17661-201ENSMUST00000170317 270 ntBASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Snrnp40Q6PE01 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.77■□□□□ 0.12
Snrnp40Q6PE01 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.77■□□□□ 0.11
Snrnp40Q6PE01 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Snrnp40Q6PE01 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.77■□□□□ 0.11
Snrnp40Q6PE01 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Snrnp40Q6PE01 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms