Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb4Q6P8W9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hmgb4Q6P8W9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb4Q6P8W9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Gm15565-201ENSMUST00000118890 427 ntBASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Gm37055-201ENSMUST00000191866 133 ntBASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hmgb4Q6P8W9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb4Q6P8W9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Mir1199-201ENSMUST00000117015 119 ntBASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb4Q6P8W9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb4Q6P8W9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb4Q6P8W9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Gm7977-201ENSMUST00000193787 748 ntBASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb4Q6P8W9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms