Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Mtag2-201ENSMUST00000058665 714 ntBASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl3Q6P1Y1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rtl3Q6P1Y1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl3Q6P1Y1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl3Q6P1Y1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Gm13158-201ENSMUST00000122007 736 ntBASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl3Q6P1Y1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtl3Q6P1Y1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Gm18666-201ENSMUST00000190039 958 ntBASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl3Q6P1Y1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms