Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf6Q6NVF9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf6Q6NVF9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf6Q6NVF9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf6Q6NVF9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf6Q6NVF9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms